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Upadhyay, Santosh Kumar and Sharma, Shailesh (2014) SSFinder: High Throughput CRISPR-Cas Target Sites Prediction Tool. BioMed Research International, 2014 (742482). Article ID 742482. ISSN 2314-6133
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Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein (Cas) system facilitates targeted genome editing in organisms. Despite high demand of this system, finding a reliable tool for the determination of specific target sites in large genomic data remained challenging. Here, we report SSFinder, a python script to perform high throughput detection of specific target sites in large nucleotide datasets. The SSFinder is a user-friendly tool, compatible with Windows, Mac OS, and Linux operating systems, and freely available online.
| Item Type: | Article |
|---|---|
| Uncontrolled Keywords: | CRISPR-Cas |
| Subjects: | Agri-Biotechnology |
| Depositing User: | Dr. Author @NABI |
| Date Deposited: | 14 Jul 2015 07:04 |
| Last Modified: | 14 Jul 2015 07:04 |
| URI: | http://nabi.sciencecentral.in/id/eprint/27 |
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